Commit Graph

111 Commits

Author SHA1 Message Date
eaa1c6dd2b update 2024-03-06 18:05:41 +08:00
3f8aa4a639 update 2024-03-06 17:14:49 +08:00
887fb856d5 add contral args 2024-03-06 17:13:58 +08:00
c9efeda17e remove 2024-03-06 14:57:17 +08:00
fb32029a61 use GPU mdrun 2024-02-22 11:02:40 +08:00
5e3198957b analysis_mut.ipynb 2024-02-02 16:27:19 +08:00
ac2c0ad23b update modify_residue_number and add batch_modify_residues 2024-02-02 11:30:33 +08:00
cacef78dfc add modify_residue_number 2024-02-02 11:16:21 +08:00
155153581f update 2024-02-01 15:30:01 +08:00
0a2e9445dd add test ipynb 2024-01-31 16:45:34 +08:00
f47533bd20 update 2024-01-31 16:45:11 +08:00
82a546f57a add record 2024-01-31 16:44:57 +08:00
b667c16b8b add bak file 2024-01-31 16:44:39 +08:00
ed56355d55 extract_chains_to_new_pdb method 2024-01-31 16:39:09 +08:00
95fed4983b 将cleanATOM保存为classmethod 2024-01-31 16:36:42 +08:00
0612fa3e41 update record 2024-01-26 15:41:50 +08:00
b40325dd20 add update record 2024-01-25 16:34:28 +08:00
8ac7246a3e add quick start 2024-01-25 16:32:32 +08:00
8b2b38c4a9 update 2024-01-25 16:09:07 +08:00
2649ed9ec6 update 2024-01-25 15:44:35 +08:00
cf912ebb74 udpate readme 2024-01-25 15:43:52 +08:00
f9be323d15 加入如果两端都没有-对齐时候产生的错误ali文件问题 2024-01-25 15:43:40 +08:00
root
804062bc7a change id 2024-01-25 13:57:37 +08:00
root
dc54997d3d update des 2024-01-25 10:31:50 +08:00
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324fda852c add pymol change_chain_identifier 2024-01-25 10:31:33 +08:00
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d73dfe93f4 change config 2024-01-24 17:14:37 +08:00
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9c14c9356e update 2024-01-24 17:14:16 +08:00
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4cf2f808e5 add strip cut 2024-01-24 17:14:02 +08:00
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2758bfb72f update 2024-01-24 17:13:37 +08:00
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5defce997a update record 2024-01-24 17:13:09 +08:00
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0eb777cb24 add seaborn 2024-01-23 13:49:24 +08:00
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38a05ebab4 change env2 to env3 2024-01-22 15:42:47 +08:00
root
2f69994afa add align_sequences and find_non_dash_indices 2024-01-22 15:41:51 +08:00
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030ac240e0 change fasta_to_ali 2024-01-22 15:40:58 +08:00
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985dda0da7 update env 2024-01-22 11:23:20 +08:00
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f007a9dfdb update env 2024-01-22 11:19:00 +08:00
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b28d51162d add record 2024-01-19 17:57:07 +08:00
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bcc21b5d36 update len in line 239 2024-01-19 16:31:55 +08:00
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3400b6a3da add sequence_similarity func 2024-01-19 16:31:30 +08:00
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426bbddf95 use sequence_base.py 2024-01-19 16:30:55 +08:00
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c27b484660 locate modeller pdb95.fsa file 2024-01-19 16:30:08 +08:00
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69a79f4188 update record 2024-01-19 16:29:34 +08:00
16ec685ca9 add sequencebaseclass 2024-01-19 14:06:00 +08:00
ae91117634 update record single 2024-01-19 14:05:12 +08:00
root
b0e7d802ed update exclude file dir 2024-01-18 18:10:25 +08:00
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d300702a15 add analysis code 2024-01-18 18:10:01 +08:00
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8064244f51 add 临时的复制文件脚本 2024-01-18 17:59:52 +08:00
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b76e113089 update 2024-01-18 15:26:06 +08:00
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62484f046e add update 2024-01-18 14:44:07 +08:00
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eb05ccd960 update test file 2024-01-18 14:43:51 +08:00