Move digger reproduction env to tools/reproduction/

- Moved bttoxin_digger_v5_repro to tools/reproduction/bttoxin_digger
- Updated docker-compose.yml to point to the new location
- This declutters the root directory while preserving the reproduction environment

tools/reproduction/bttoxin_digger/examples/COMPARE_REPORT.md

@@ -0,0 +1,41 @@
+# BtToxin_Digger pixi vs docker comparison (examples)
+
+## Inputs
+
+- Pixi C15: `runs/bttoxin_digger_v5_repro/examples/C15_pixi_v5/Results/Toxins/All_Toxins.txt`
+- Docker C15: `runs/bttoxin_digger_v5_repro/examples/C15_docker/digger/Results/Toxins/All_Toxins.txt`
+- Pixi HAN055: `runs/bttoxin_digger_v5_repro/examples/HAN055_pixi_v5_clean/Results/Toxins/All_Toxins.txt`
+- Docker HAN055: `runs/bttoxin_digger_v5_repro/examples/HAN055_docker/digger/Results/Toxins/All_Toxins.txt`
+
+Diff files:
+
+- `runs/bttoxin_digger_v5_repro/examples/diffs/C15_docker_vs_pixi_v5.diff`
+- `runs/bttoxin_digger_v5_repro/examples/diffs/HAN055_docker_vs_pixi_v5_clean.diff`
+
+## C15 (docker vs pixi v5)
+
+- Row counts: 24 vs 24
+- Hit_id set: identical
+- Differences: 6 rows differ (4 BLAST E-values, 2 SVM flags)
+
+```
+Protein_id          Field            docker_value  pixi_value
+NZ_CP021436.1_06204 Evalue of blast  1e-35         2e-35
+NZ_CP021436.1_06727 Evalue of blast  9e-33         1e-32
+NZ_CP021436.1_12182 Evalue of blast  7e-60         8e-60
+NZ_CP021438.1_00072 SVM              NO            YES
+NZ_CP021438.1_00163 Evalue of blast  3e-52         4e-52
+NZ_CP021439.1_00043 SVM              YES           NO
+```
+
+## HAN055 (docker vs pixi v5 clean)
+
+- Row counts: 24 vs 24
+- Hit_id set: identical
+- Differences: two rows differ only in the SVM flag
+
+```
+Protein_id        Hit_id    docker_SVM  pixi_SVM
+CP001910.1_00155  Cry2Aa22  YES         NO
+CP001910.1_00475  Cry1Aa3   NO          YES
+```