&&

2024-07-12 18:50:27 +08:00
parent d52d7c8858
commit 250b66147c
1 changed files with 330 additions and 0 deletions
--- a/finetune/Dockerfile.o
+++ b/finetune/Dockerfile.o
@@ -0,0 +1,330 @@
+# syntax=docker/dockerfile:1
+
+# NOTE: Building this image require's docker version >= 23.0.
+#
+# For reference:
+# - https://docs.docker.com/build/dockerfile/frontend/#stable-channel
+ARG CUDA_VERSION=12.1.0
+FROM nvidia/cuda:${CUDA_VERSION}-cudnn8-devel-ubuntu22.04
+ARG HTTP_PROXY
+ARG HTTPS_PROXY
+ENV http_proxy=${HTTP_PROXY}
+ENV https_proxy=${HTTPS_PROXY}
+ARG DEBIAN_FRONTEND="noninteractive"
+ENV DEBIAN_FRONTEND=${DEBIAN_FRONTEND}
+ENV MAMBA_ROOT_PREFIX=~/micromamba
+ARG ROOT_PASSWD="root"
+ENV ROOT_PASSWD=${ROOT_PASSWD}
+WORKDIR /root
+SHELL ["/bin/bash", "-c"]
+COPY id_rsa.pub /root/.ssh/id_rsa.pub
+
+# base tools
+RUN apt-get update && \
+    apt-get install -y rdma-core ibverbs-utils perftest libibverbs-dev infiniband-diags && \
+    apt-get install -y wget curl htop jq vim bash libaio-dev build-essential openssh-server python3 python3-pip bzip2 && \
+    apt-get install -y --no-install-recommends software-properties-common build-essential autotools-dev nfs-common pdsh cmake g++ gcc curl wget vim tmux emacs less unzip htop iftop iotop ca-certificates openssh-client openssh-server rsync iputils-ping net-tools sudo llvm-dev re2c && \
+    add-apt-repository ppa:git-core/ppa -y && \
+    apt-get install -y git libnuma-dev wget && \
+    wget -O - https://apt.kitware.com/keys/kitware-archive-latest.asc | sudo apt-key add - && \
+    sudo apt-add-repository "deb https://apt.kitware.com/ubuntu/ $(lsb_release -cs) main" && \
+    sudo apt-get update && \
+    sudo apt-get install -y cmake && \
+    sed -i 's/#PermitRootLogin prohibit-password/PermitRootLogin yes/' /etc/ssh/sshd_config && \
+    sed -i 's/#PasswordAuthentication yes/PasswordAuthentication yes/' /etc/ssh/sshd_config && \
+    sed -i 's/PubkeyAuthentication no/PubkeyAuthentication yes/' /etc/ssh/sshd_config && \
+    sed -i 's/^#Port 22/Port 22/' /etc/ssh/sshd_config && \
+    mkdir /var/run/sshd && \
+    echo "root:${ROOT_PASSWD}" | chpasswd && \
+    mkdir -p ~/.pip && \
+    wget -qO- https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh -O /tmp/miniconda.sh && \
+    bash /tmp/miniconda.sh -b -p /opt/conda && \
+    rm /tmp/miniconda.sh && \
+    conda init bash && \
+    ln -s /opt/conda/etc/profile.d/conda.sh /etc/profile.d/conda.sh && \
+    echo ". /opt/conda/etc/profile.d/conda.sh" >> ~/.bashrc && \
+    cat <<EOF > ~/.condarc
+channels:
+  - conda-forge
+  - bioconda
+  - pytorch
+  - pytorch-nightly
+  - nvidia
+  - defaults
+show_channel_urls: true
+EOF
+
+# reference: https://github.com/huggingface/transformers/blob/main/docker/transformers-pytorch-deepspeed-latest-gpu/Dockerfile
+# PyTorch
+ARG CONDA_ENV_NAME="deepspeed"
+ENV CONDA_ENV_NAME=${CONDA_ENV_NAME}
+ARG PYTHON_VERSION=3.10
+ENV PYTHON_VERSION=${PYTHON_VERSION}
+ENV PATH=/opt/conda/envs/${CONDA_ENV_NAME}/bin:/usr/bin:/opt/conda/bin:$PATH
+ENV DEEPSPEED_PYTHON="/opt/conda/envs/${CONDA_ENV_NAME}/bin/python3"
+ENV REF='main'
+ENV STAGE_DIR=/tmp
+ENV OPENMPI_BASEVERSION=4.1
+ENV OPENMPI_VERSION=${OPENMPI_BASEVERSION}.6
+ARG CUDA='cu121'
+ENV CUDA=${CUDA}
+ARG PYTORCH_VERSION=2.3.1
+ENV PYTORCH_VERSION=${PYTORCH_VERSION}
+ARG TORCHVISION_VERSION=0.18.1
+ENV TORCHVISION_VERSION=${TORCHVISION_VERSION}
+ARG TORCHAUDIO_VERSION=2.3.1
+ENV TORCHAUDIO_VERSION=${TORCHAUDIO_VERSION}
+ARG PYTORCH_CUDA_VERSION=12.1
+ENV PYTORCH_CUDA_VERSION=${PYTORCH_CUDA_VERSION}
+ARG SETUPTOOLS_VERSION=69.5.1
+ENV SETUPTOOLS_VERSION=${SETUPTOOLS_VERSION}
+ARG USE_CUDA=1
+ENV USE_CUDA=${USE_CUDA}
+ARG USE_ROCM=0
+ENV USE_ROCM=${USE_ROCM}
+ARG USE_XPU=0
+ENV USE_XPU=${USE_XPU}
+ARG _GLIBCXX_USE_CXX11_ABI=1
+ENV _GLIBCXX_USE_CXX11_ABI=${_GLIBCXX_USE_CXX11_ABI}
+RUN source /opt/conda/etc/profile.d/conda.sh && \
+    conda create -n ${CONDA_ENV_NAME} python=${PYTHON_VERSION} -c conda-forge -y && \
+    echo "conda activate ${CONDA_ENV_NAME}" >> ~/.bashrc && \
+    which python > ~/python_path.txt && \
+    conda activate ${CONDA_ENV_NAME} && \
+    git clone https://github.com/ninja-build/ninja.git ${STAGE_DIR}/ninja && \
+    cd ${STAGE_DIR}/ninja && \
+    git clone https://github.com/google/googletest.git && \
+    python ./configure.py --bootstrap && \
+    conda run -n ${CONDA_ENV_NAME} bash -c "CXXFLAGS='-pthread' LDFLAGS='-pthread' python ./configure.py --bootstrap --gtest-source-dir=$(pwd)/googletest" && \
+    ./ninja all && \
+    ./ninja_test && \
+    python3 -m pip install --no-cache-dir --upgrade pip && \
+    python3 -m pip install open_clip_torch nvidia-ml-py3 opencv-contrib-python && \
+    conda clean -afy && \
+    git clone https://github.com/huggingface/transformers && cd transformers && git checkout $REF && cd .. && \
+    python -m pip install setuptools==${SETUPTOOLS_VERSION} && \
+    python3 -m pip install --no-cache-dir ./transformers[deepspeed-testing] && \
+    python3 -m pip uninstall -y torch torchvision torchaudio && \
+    python3 -m pip install torch==${PYTORCH_VERSION}+${CUDA} torchvision==${TORCHVISION_VERSION}+${CUDA} torchaudio==${TORCHAUDIO_VERSION} xformers --extra-index-url https://download.pytorch.org/whl/${CUDA} && \
+    python3 -m pip install --no-cache-dir git+https://github.com/huggingface/accelerate@main#egg=accelerate && \
+    python3 -m pip uninstall -y transformer-engine && \
+    python3 -m pip uninstall -y torch-tensorrt && \
+    python3 -m pip uninstall -y apex
+
+# install apex
+RUN source /opt/conda/etc/profile.d/conda.sh && \
+    conda activate ${CONDA_ENV_NAME} && \
+    git clone https://github.com/NVIDIA/apex ${STAGE_DIR}/apex && \
+    cd apex && \
+    MAX_JOBS=1 python3 -m pip install -v --disable-pip-version-check --no-cache-dir --no-build-isolation --config-settings "--build-option=--cpp_ext" --config-settings "--build-option=--cuda_ext" ./ && \
+    python -c "import apex.amp; print('Apex is installed and the amp module is available.')" && \
+    cd .. && \
+    rm -rf ${STAGE_DIR}/apex
+
+ENV MLNX_OFED_VERSION=5.8-4.1.5.0
+RUN source /opt/conda/etc/profile.d/conda.sh && \
+    conda activate ${CONDA_ENV_NAME} && \
+    mkdir -p ${STAGE_DIR} && \
+    wget -q -O - http://www.mellanox.com/downloads/ofed/MLNX_OFED-${MLNX_OFED_VERSION}/MLNX_OFED_LINUX-${MLNX_OFED_VERSION}-ubuntu22.04-x86_64.tgz | tar xzf - && \
+    cd MLNX_OFED_LINUX-${MLNX_OFED_VERSION}-ubuntu22.04-x86_64 && \
+    ./mlnxofedinstall --user-space-only --without-fw-update --all -q && \
+    cd ${STAGE_DIR} && \
+    rm -rf ${STAGE_DIR}/MLNX_OFED_LINUX-${MLNX_OFED_VERSION}-ubuntu22.04-x86_64*
+
+ENV NV_PEER_MEM_VERSION=1.2
+ENV NV_PEER_MEM_TAG=${NV_PEER_MEM_VERSION}-0
+RUN source /opt/conda/etc/profile.d/conda.sh && \
+    conda activate ${CONDA_ENV_NAME} && \
+    rm -rf ${STAGE_DIR} && \
+    mkdir -p ${STAGE_DIR} && \
+    git clone https://github.com/Mellanox/nv_peer_memory.git --branch ${NV_PEER_MEM_TAG} ${STAGE_DIR}/nv_peer_memory && \
+    cd ${STAGE_DIR}/nv_peer_memory && \
+    ./build_module.sh && \
+    cd ${STAGE_DIR} && \
+    tar xzf ${STAGE_DIR}/nvidia-peer-memory_${NV_PEER_MEM_VERSION}.orig.tar.gz && \
+    cd ${STAGE_DIR}/nvidia-peer-memory-${NV_PEER_MEM_VERSION} && \
+    apt-get update && \
+    apt --fix-broken install -y && \
+    apt-get install -y dkms && \
+    dpkg-buildpackage -us -uc && \
+    dpkg -i ${STAGE_DIR}/nvidia-peer-memory_${NV_PEER_MEM_TAG}_all.deb
+
+# install mpi
+ENV PATH=/usr/local/mpi/bin:${PATH} 
+ENV LD_LIBRARY_PATH=/usr/local/lib:/usr/local/mpi/lib:/usr/local/mpi/lib64:${LD_LIBRARY_PATH}
+RUN source /opt/conda/etc/profile.d/conda.sh && \
+    conda activate ${CONDA_ENV_NAME} && \
+    rm -rf ${STAGE_DIR} && \
+    mkdir -p ${STAGE_DIR} && \
+    cd ${STAGE_DIR} && \
+    wget -q -O - https://download.open-mpi.org/release/open-mpi/v${OPENMPI_BASEVERSION}/openmpi-${OPENMPI_VERSION}.tar.gz | tar xzf - && \
+    cd openmpi-${OPENMPI_VERSION} && \
+    ./configure --prefix=/usr/local/openmpi-${OPENMPI_VERSION} && \
+    make -j"$(nproc)" install && \
+    ln -s /usr/local/openmpi-${OPENMPI_VERSION} /usr/local/mpi && \
+    test -f /usr/local/mpi/bin/mpic++ && \
+    cd ${STAGE_DIR} && \
+    rm -r ${STAGE_DIR}/openmpi-${OPENMPI_VERSION} && \
+    mv /usr/local/mpi/bin/mpirun /usr/local/mpi/bin/mpirun.real && \
+    echo '#!/bin/bash' > /usr/local/mpi/bin/mpirun && \
+    echo 'mpirun.real --allow-run-as-root --prefix /usr/local/mpi "$@"' >> /usr/local/mpi/bin/mpirun && \
+    chmod a+x /usr/local/mpi/bin/mpirun
+
+# SSH daemon port inside container cannot conflict with host OS port
+# ENV SSH_PORT=2222
+# RUN source /opt/conda/etc/profile.d/conda.sh && \
+#     conda activate ${CONDA_ENV_NAME} && \
+#     cat /etc/ssh/sshd_config > ${STAGE_DIR}/sshd_config && \
+#     sed "0,/^Port 22/s//Port ${SSH_PORT}/" ${STAGE_DIR}/sshd_config > /etc/ssh/sshd_config
+
+RUN source /opt/conda/etc/profile.d/conda.sh && \
+    conda activate ${CONDA_ENV_NAME} && \
+    useradd --create-home --uid 1000 --shell /bin/bash deepspeed && \
+    usermod -aG sudo deepspeed && \
+    echo "deepspeed ALL=(ALL) NOPASSWD: ALL" >> /etc/sudoers
+
+# install cutlass https://github.com/NVIDIA/cutlass
+# H100: architecture is Hopper (cutlass need add : cmake .. -DCUTLASS_NVCC_ARCHS="90a" )
+# A100: architecture is Ampere 
+# V100: architecture is Volta 
+# T4: architecture is Turing 
+# ENV CUDACXX=${CUDA_INSTALL_PATH}/bin/nvcc
+# 70：适用于 NVIDIA Volta 架构（如 Tesla V100）。
+# 75：适用于 NVIDIA Turing 架构（如 Tesla T4）。
+# 80：适用于 NVIDIA Ampere 架构（如 A100）。
+# 90a：适用于 NVIDIA Hopper 架构（如 H100）。
+# 89:GeForce RTX 4090 
+ARG DCUTLASS_NVCC_ARCHS="80;89;90a"
+ENV DCUTLASS_NVCC_ARCHS=${DCUTLASS_NVCC_ARCHS}
+RUN source /opt/conda/etc/profile.d/conda.sh && \
+    conda activate ${CONDA_ENV_NAME} && \
+    git clone https://github.com/NVIDIA/cutlass /opt/cutlass && \
+    cd /opt/cutlass && \
+    git checkout . && \
+    git checkout master && \
+    mkdir build && \
+    cd build && \
+    cmake .. -DCUTLASS_NVCC_ARCHS=${DCUTLASS_NVCC_ARCHS} -DCUTLASS_ENABLE_TESTS=OFF -DCUTLASS_UNITY_BUILD_ENABLED=ON && \
+    make -j"$(nproc)" install && \
+    cd ..
+
+# Some Packages from https://github.com/microsoft/DeepSpeed/blob/master/docker/Dockerfile
+# RUN source /opt/conda/etc/profile.d/conda.sh && \
+#     conda activate ${CONDA_ENV_NAME} && \
+#     apt-get update && \
+#     apt-get install -y --no-install-recommends libsndfile-dev libcupti-dev libjpeg-dev libpng-dev screen libaio-dev && \
+#     python -m pip install pipdeptree psutil yappi cffi ipdb pandas matplotlib py3nvml pyarrow graphviz astor boto3 tqdm sentencepiece msgpack requests pandas sphinx sphinx_rtd_theme scipy numpy scikit-learn nvidia-ml-py3 mpi4py
+
+# install deepspeed step 1
+RUN source /opt/conda/etc/profile.d/conda.sh && \
+    conda activate ${CONDA_ENV_NAME} && \
+    /opt/conda/envs/${CONDA_ENV_NAME}/bin/python -m pip install setuptools==${SETUPTOOLS_VERSION} && \
+    git clone https://github.com/oneapi-src/oneCCL.git ${STAGE_DIR}/oneCCL && \
+    cd ${STAGE_DIR}/oneCCL && \
+    git checkout . && \
+    git checkout master && \
+    mkdir build && \
+    cd build && \
+    cmake .. -DCMAKE_INSTALL_PREFIX=/usr/local && \
+    make -j"$(nproc)" install
+
+# install deepspeed step 2
+ARG CUDA_ARCH_LIST="80;86;89;90"
+ENV CUDA_ARCH_LIST=${CUDA_ARCH_LIST}
+RUN source /opt/conda/etc/profile.d/conda.sh && \
+    conda activate ${CONDA_ENV_NAME} && \
+    git clone https://github.com/microsoft/DeepSpeed-Kernels.git ${STAGE_DIR}/DeepSpeed-Kernels && \
+    cd ${STAGE_DIR}/DeepSpeed-Kernels && \
+    CUDA_ARCH_LIST=${CUDA_ARCH_LIST} python -m pip install -v .
+
+ARG DEEPSPEED_VERSION="v0.14.3"
+ENV DEEPSPEED_VERSION=${DEEPSPEED_VERSION}
+ARG DEEPSPEED_INSTALL_FLAGS="--allow_sudo --pip_sudo --verbose"
+ENV DEEPSPEED_INSTALL_FLAGS=${DEEPSPEED_INSTALL_FLAGS}
+ARG DS_BUILD_SPARSE_ATTN=0
+ENV DS_BUILD_SPARSE_ATTN=${DS_BUILD_SPARSE_ATTN}
+ARG DS_BUILD_FUSED_ADAM=1
+ENV DS_BUILD_FUSED_ADAM=${DS_BUILD_FUSED_ADAM}
+ARG DS_BUILD_CPU_ADAM=1
+ENV DS_BUILD_CPU_ADAM=${DS_BUILD_CPU_ADAM}
+ARG DS_BUILD_OPS=1
+ENV DS_BUILD_OPS=${DS_BUILD_OPS}
+ARG HOSTFILE_CONTENT=""
+ENV HOSTFILE_CONTENT=${HOSTFILE_CONTENT}
+ENV CUTLASS_PATH='/opt/cutlass'
+ENV CUDA_HOME='/usr/local/cuda'
+ENV LD_LIBRARY_PATH=${CUDA_HOME}/lib64:${LD_LIBRARY_PATH}
+ENV PATH=${CUDA_HOME}/bin:${PATH}
+
+# install deepspeed step 3
+RUN source /opt/conda/etc/profile.d/conda.sh && \
+    conda activate ${CONDA_ENV_NAME} && \
+    git clone https://github.com/microsoft/DeepSpeed.git ${STAGE_DIR}/DeepSpeed && \
+    cd ${STAGE_DIR}/DeepSpeed && \
+    git checkout ${DEEPSPEED_VERSION} && \
+    sed 's/pip install/python -m pip install/' install.sh > install_modified.sh && \
+    chmod +x ./install_modified.sh && \
+    if [ -n "${HOSTFILE_CONTENT}" ]; then \
+        echo "${HOSTFILE_CONTENT}" > /tmp/hostfile && \
+        INSTALL_CMD="./install_modified.sh ${DEEPSPEED_INSTALL_FLAGS} --hostfile /tmp/hostfile"; \
+    else \
+        INSTALL_CMD="./install_modified.sh ${DEEPSPEED_INSTALL_FLAGS}"; \
+    fi && \
+    eval $INSTALL_CMD && \
+    cat <<EOF > ~/compile_deepspeed_ops.py
+import deepspeed
+
+def compile_ops():
+    builders = [
+        deepspeed.ops.op_builder.AsyncIOBuilder,
+        deepspeed.ops.op_builder.FusedAdamBuilder,
+        deepspeed.ops.op_builder.CPUAdamBuilder,
+        deepspeed.ops.op_builder.CPUAdagradBuilder,
+        deepspeed.ops.op_builder.CPULionBuilder,
+        deepspeed.ops.op_builder.EvoformerAttnBuilder,
+        deepspeed.ops.op_builder.FPQuantizerBuilder,
+        deepspeed.ops.op_builder.FusedLambBuilder,
+        deepspeed.ops.op_builder.FusedLionBuilder,
+        deepspeed.ops.op_builder.QuantizerBuilder,
+        deepspeed.ops.op_builder.RaggedOpsBuilder,
+        deepspeed.ops.op_builder.RandomLTDBuilder,
+        deepspeed.ops.op_builder.SparseAttnBuilder,
+        deepspeed.ops.op_builder.SpatialInferenceBuilder,
+        deepspeed.ops.op_builder.TransformerBuilder,
+        deepspeed.ops.op_builder.StochasticTransformerBuilder,
+    ]
+    
+    for builder in builders:
+        print(f"Compiling {builder.__name__}")
+        builder().load()
+
+if __name__ == "__main__":
+    compile_ops()
+EOF && \
+    python compile_deepspeed_ops.py && \
+    ds_report
+
+# install transformers and flash-attn
+RUN source /opt/conda/etc/profile.d/conda.sh && \
+    conda activate ${CONDA_ENV_NAME} && \
+    git clone https://github.com/huggingface/transformers ${STAGE_DIR}/transformers && \
+    cd ${STAGE_DIR}/transformers && \
+    python3 ./setup.py develop && \
+    python3 -m pip install -U --no-cache-dir "pydantic<2" && \
+    pip install flash-attn --no-build-isolation -i https://pypi.org/simple/ --trusted-host pypi.org
+
+# other packages
+ENV TORCH_CUDA_ARCH_LIST="80;86;89;90"
+RUN source /opt/conda/etc/profile.d/conda.sh && \
+    conda activate ${CONDA_ENV_NAME} && \
+    pip3 install optimum && \
+    pip3 install peft tiktoken tqdm matplotlib seaborn numpy pandas scikit-learn diffusers huggingface_hub spacy blobfile pycocotools open_clip_torch zstandard -i https://pypi.org/simple/ --trusted-host pypi.org
+
+ARG DEEPSPEED_TRAIN='/data/train_data'
+ENV DEEPSPEED_TRAIN=DEEPSPEED_TRAIN
+ARG DEEPSPEED_VALIDATION='/data/validation_data'
+ENV DEEPSPEED_VALIDATION=DEEPSPEED_VALIDATION
+ARG NCCL_SOCKET_IFNAME='eth0'
+
+CMD ["/usr/sbin/sshd", "-D"]
+# CMD ["/bin/bash", "-c", "/usr/sbin/sshd -D & while true; do sleep 1000; done"]