Initial commit: BtToxin Pipeline project structure

README.md

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+# BtToxin Pipeline
+
+Automated Bacillus thuringiensis toxin mining system with CI/CD integration.
+
+## Quick Start
+
+### Prerequisites
+
+- Docker / Podman
+- Python 3.10+
+- Node.js 18+
+
+### Development Setup
+```bash
+# 1. Clone and setup
+git clone <your-repo>
+cd bttoxin-pipeline
+
+# 2. Install dependencies
+cd backend && pip install -r requirements.txt
+cd ../frontend && npm install
+
+# 3. Start services
+docker compose -f config/docker-compose.yml up -d
+
+# 4. Run backend
+cd backend
+uvicorn app.main:app --reload
+
+# 5. Run frontend
+cd frontend
+npm run dev
+```
+
+## Architecture
+
+Frontend (Vue 3) → Backend (FastAPI) → Celery → Docker (BtToxin_Digger)
+                         ↓
+                   PostgreSQL + Redis
+                         ↓
+                      S3/MinIO
+
+## Documentation
+
+- [API Documentation](docs/api.md)
+- [Deployment Guide](docs/deployment.md)
+- [Usage Guide](docs/usage.md)
+
+## License
+
+MIT License