From 0409e0e203889ec997ac8c86187116f13545d8b3 Mon Sep 17 00:00:00 2001 From: mm644706215 Date: Fri, 17 Jan 2025 15:28:43 +0800 Subject: [PATCH] remove --- docker/dockerfile.stage | 80 ----------------------------------------- 1 file changed, 80 deletions(-) delete mode 100644 docker/dockerfile.stage diff --git a/docker/dockerfile.stage b/docker/dockerfile.stage deleted file mode 100644 index 3eef335..0000000 --- a/docker/dockerfile.stage +++ /dev/null @@ -1,80 +0,0 @@ -# 第一阶段:构建阶段 -FROM ubuntu:22.04 AS builder - -# 设置环境变量 -ENV DEBIAN_FRONTEND=noninteractive - -# 更新系统、安装依赖并清理缓存 -RUN apt update && apt upgrade -y && \ - apt install -y \ - build-essential \ - gcc \ - g++ \ - gfortran \ - cmake \ - make \ - wget \ - tar \ - libatlas-base-dev \ - liblapacke-dev \ - libblas-dev \ - git \ - libedit-dev \ - zlib1g-dev \ - openbabel \ - libeigen3-dev \ - automake \ - autoconf \ - libtool \ - vim \ - gnuplot \ - pymol \ - && ln -s /usr/bin/obabel /usr/bin/babel \ - && apt clean \ - && rm -rf /var/lib/apt/lists/* - -# 克隆 Open3DQSAR 仓库 -RUN git clone https://github.com/UnixJunkie/Open3DQSAR - -# 进入 Open3DQSAR 目录并构建 -WORKDIR /Open3DQSAR/open3dqsar -RUN ./bootstrap && \ - ./configure --with-atlas && \ - make -j$(nproc) && \ - make install - -# 第二阶段:运行阶段 -FROM ubuntu:22.04 - -# 设置环境变量 -ENV DEBIAN_FRONTEND=noninteractive \ - O3_BABEL_PATH=/usr/bin \ - O3_GNUPLOT=/usr/bin/gnuplot \ - O3_PYMOL=/usr/bin/pymol \ - O3_TEMP_PATH=/tmp \ - O3_QM_ENGINE=/usr/local/bin/orca \ - O3_MD_GRID_PATH=/usr/bin/mdgrid \ - O3_CS3D=/usr/bin/cs3d - -# 安装运行时依赖 -RUN apt update && apt install -y \ - libatlas-base-dev \ - liblapacke-dev \ - libblas-dev \ - openbabel \ - gnuplot \ - pymol \ - && ln -s /usr/bin/obabel /usr/bin/babel \ - && apt clean \ - && rm -rf /var/lib/apt/lists/* - -# 从构建阶段复制构建结果 -COPY --from=builder /usr/local/bin /usr/local/bin -COPY --from=builder /Open3DQSAR /Open3DQSAR - -# 进入测试目录并运行测试脚本 -WORKDIR /Open3DQSAR/open3dqsar/test -RUN ./test.sh > test.log 2>&1 & - -# 设置容器启动时的默认命令(保持容器运行) -ENTRYPOINT ["tail", "-f", "/dev/null"] \ No newline at end of file