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feat(validation): archive key result assets

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Keep key validation outputs and analysis tables tracked directly,
package analysis plot PNGs into a small tar.gz backup, and add
analysis scripts plus tests so the stored results remain
reproducible without flooding git with large image trees.
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lingyuzeng
2026-03-19 21:29:54 +08:00
parent f6bf9e85a3
commit 8071a141ee
20 changed files with 36723 additions and 0 deletions
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15
validation_output/fragment_library_analysis/ring16_position_count_comparison.csv Normal file
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cleavage_position,total_fragments_all,unique_fragments_all,mean_atom_count_all,total_fragments_gt3,unique_fragments_gt3,mean_atom_count_gt3,gt3_row_fraction,gt3_unique_fraction
3,1048,121,5.097328244274809,269,117,15.405204460966543,0.2566793893129771,0.9669421487603306
4,595,70,6.894117647058824,269,63,13.37546468401487,0.45210084033613446,0.9
5,54,2,1.0,0,0,0.0,0.0,0.0
6,536,68,2.9402985074626864,89,60,12.584269662921349,0.166044776119403,0.8823529411764706
7,23,4,2.5652173913043477,4,1,10.0,0.17391304347826086,0.25
8,123,4,1.016260162601626,0,0,0.0,0.0,0.0
9,734,41,2.310626702997275,141,37,7.815602836879433,0.19209809264305178,0.9024390243902439
10,993,7,1.0433031218529707,4,4,11.5,0.004028197381671702,0.5714285714285714
11,249,8,1.3895582329317269,7,5,14.857142857142858,0.028112449799196786,0.625
12,930,99,3.6268817204301076,177,83,10.0,0.19032258064516128,0.8383838383838383
13,876,198,15.501141552511415,709,193,18.90691114245416,0.8093607305936074,0.9747474747474747
14,1065,6,1.267605633802817,1,1,14.0,0.0009389671361502347,0.16666666666666666
15,747,13,2.0174029451137887,205,8,4.692682926829268,0.2744310575635877,0.6153846153846154
16,135,8,1.9851851851851852,5,5,8.4,0.037037037037037035,0.625
1 cleavage_position total_fragments_all unique_fragments_all mean_atom_count_all total_fragments_gt3 unique_fragments_gt3 mean_atom_count_gt3 gt3_row_fraction gt3_unique_fraction
2 3 1048 121 5.097328244274809 269 117 15.405204460966543 0.2566793893129771 0.9669421487603306
3 4 595 70 6.894117647058824 269 63 13.37546468401487 0.45210084033613446 0.9
4 5 54 2 1.0 0 0 0.0 0.0 0.0
5 6 536 68 2.9402985074626864 89 60 12.584269662921349 0.166044776119403 0.8823529411764706
6 7 23 4 2.5652173913043477 4 1 10.0 0.17391304347826086 0.25
7 8 123 4 1.016260162601626 0 0 0.0 0.0 0.0
8 9 734 41 2.310626702997275 141 37 7.815602836879433 0.19209809264305178 0.9024390243902439
9 10 993 7 1.0433031218529707 4 4 11.5 0.004028197381671702 0.5714285714285714
10 11 249 8 1.3895582329317269 7 5 14.857142857142858 0.028112449799196786 0.625
11 12 930 99 3.6268817204301076 177 83 10.0 0.19032258064516128 0.8383838383838383
12 13 876 198 15.501141552511415 709 193 18.90691114245416 0.8093607305936074 0.9747474747474747
13 14 1065 6 1.267605633802817 1 1 14.0 0.0009389671361502347 0.16666666666666666
14 15 747 13 2.0174029451137887 205 8 4.692682926829268 0.2744310575635877 0.6153846153846154
15 16 135 8 1.9851851851851852 5 5 8.4 0.037037037037037035 0.625