From 3847ccb2ffdeae3542b54ef12cc7544e18ef12fa Mon Sep 17 00:00:00 2001 From: root Date: Sat, 5 Oct 2024 14:48:49 +0800 Subject: [PATCH] change md run time --- script/S112D/S112D.sh | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/script/S112D/S112D.sh b/script/S112D/S112D.sh index 46a0a69..39f8c93 100755 --- a/script/S112D/S112D.sh +++ b/script/S112D/S112D.sh @@ -365,7 +365,7 @@ cat << EOF > ${MDRUN_NAME}.mdp title = Protein-ligand complex MD simulation ; Run parameters integrator = md ; leap-frog integrator -nsteps = 5000000 ; 2 * 5000000 = 10000 ps (10 ns) +nsteps = ${NSTEPS} ; 2 * 5000000 = 10000 ps (10 ns) dt = 0.002 ; 2 fs ; Output control nstenergy = 5000 ; save energies every 10.0 ps