hotwa ae4c6351d9 feat: migrate from Docker to pixi for BtToxin_Digger execution ...

- Add pixi.toml with digger and pipeline environments
- Implement PixiRunner class replacing DockerContainerManager
- Add run_digger_stage.py for standalone digger execution
- Update run_single_fna_pipeline.py to use PixiRunner
- Remove docker dependency from pyproject.toml
- Delete docker_client.py (no longer needed)

BREAKING CHANGE: Docker is no longer required. Use 'pixi install' instead.

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alembic

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app

feat: migrate from Docker to pixi for BtToxin_Digger execution

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Dockerfile

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requirements.txt

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