name: prokka channels: - https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge - bioconda - conda-forge - https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/main - ursky - https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/msys2/ - https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/main/ - https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free/ - defaults dependencies: - _libgcc_mutex=0.1=conda_forge - _openmp_mutex=4.5=2_gnu - alsa-lib=1.2.11=hd590300_1 - aragorn=1.2.41=h7b50bb2_5 - argcomplete=3.6.2=pyhd8ed1ab_0 - argh=0.31.3=pyhd8ed1ab_1 - argtable2=2.13=hd590300_1004 - aria2=1.23.0=0 - arpack=3.7.0=hdefa2d7_2 - barrnap=0.9=hdfd78af_4 - bedtools=2.31.1=hf5e1c6e_2 - biocode=0.12.1=pyhdfd78af_0 - biopython=1.85=py311h49ec1c0_2 - blast=2.16.0=hc155240_3 - blast-legacy=2.2.26=hf7ff83a_5 - boost-cpp=1.74.0=h75c5d50_8 - brotli=1.1.0=hb03c661_4 - brotli-bin=1.1.0=hb03c661_4 - brotli-python=1.1.0=py311h1ddb823_4 - bzip2=1.0.8=hda65f42_8 - c-ares=1.34.5=hb9d3cd8_0 - ca-certificates=2025.8.3=hbd8a1cb_0 - cairo=1.16.0=hb05425b_5 - capnproto=1.0.2=hfc55251_1 - cd-hit=4.8.1=h43eeafb_11 - certifi=2025.8.3=pyhd8ed1ab_0 - cffi=2.0.0=py311h5b438cf_0 - charset-normalizer=3.4.3=pyhd8ed1ab_0 - clustalo=1.2.4=h503566f_10 - clustalw=2.1=h9948957_12 - colorama=0.4.6=pyhd8ed1ab_1 - consan=1.2=h7b50bb2_7 - contourpy=1.3.3=py311hdf67eae_2 - curl=7.87.0=h6312ad2_0 - cycler=0.12.1=pyhd8ed1ab_1 - dendropy=5.0.8=pyhdfd78af_1 - dialign-tx=1.0.2=h7b50bb2_8 - diamond=2.0.15=hb97b32f_1 - dnspython=2.8.0=pyhcf101f3_0 - easel=0.49=hb6cb901_3 - eggnog-mapper=2.1.13=pyhdfd78af_2 - entrez-direct=22.4=he881be0_0 - expat=2.7.1=hecca717_0 - famsa=2.2.3=h9948957_1 - fasttree=2.2.0=h7b50bb2_0 - font-ttf-dejavu-sans-mono=2.37=hab24e00_0 - font-ttf-inconsolata=3.000=h77eed37_0 - font-ttf-source-code-pro=2.038=h77eed37_0 - font-ttf-ubuntu=0.83=h77eed37_3 - fontconfig=2.14.2=h14ed4e7_0 - fonts-conda-ecosystem=1=0 - fonts-conda-forge=1=0 - fonttools=4.60.1=py311h3778330_0 - freetype=2.12.1=h267a509_2 - gawk=5.3.1=hcd3d067_0 - gffutils=0.13=pyh7cba7a3_0 - giflib=5.2.2=hd590300_0 - glib=2.80.2=hf974151_0 - glib-tools=2.80.2=hb6ce0ca_0 - glpk=5.0=h445213a_0 - gmp=6.3.0=hac33072_2 - gnutls=3.8.9=h86084c0_1 - graphite2=1.3.14=hecca717_2 - gsl=2.7=he838d99_0 - h2=4.3.0=pyhcf101f3_0 - harfbuzz=6.0.0=h8e241bc_0 - hmmer=3.4=hb6cb901_4 - hpack=4.1.0=pyhd8ed1ab_0 - hyperframe=6.1.0=pyhd8ed1ab_0 - icu=70.1=h27087fc_0 - idna=3.10=pyhd8ed1ab_1 - importlib-metadata=8.7.0=pyhe01879c_1 - infernal=1.1.5=pl5321h7b50bb2_4 - intbitset=3.0.2=py311h459d7ec_1 - intel-openmp=2023.1.0=hdb19cb5_46306 - jinja2=3.1.6=pyhd8ed1ab_0 - joblib=1.5.2=pyhd8ed1ab_0 - kalign2=2.04=h7b50bb2_8 - keyutils=1.6.3=hb9d3cd8_0 - kiwisolver=1.4.9=py311h724c32c_1 - krb5=1.20.1=hf9c8cef_0 - lcms2=2.16=hb7c19ff_0 - ld_impl_linux-64=2.44=ha97dd6f_2 - lerc=4.0.0=h0aef613_1 - libasprintf=0.25.1=h3f43e3d_1 - libblas=3.9.0=36_h4a7cf45_openblas - libbrotlicommon=1.1.0=hb03c661_4 - libbrotlidec=1.1.0=hb03c661_4 - libbrotlienc=1.1.0=hb03c661_4 - libcblas=3.9.0=36_h0358290_openblas - libcups=2.3.3=h36d4200_3 - libcurl=7.87.0=h6312ad2_0 - libdb=6.2.32=h9c3ff4c_0 - libdeflate=1.20=hd590300_0 - libedit=3.1.20250104=pl5321h7949ede_0 - libev=4.33=hd590300_2 - libexpat=2.7.1=hecca717_0 - libffi=3.4.6=h2dba641_1 - libgcc=15.1.0=h767d61c_5 - libgcc-ng=15.1.0=h69a702a_5 - libgettextpo=0.25.1=h3f43e3d_1 - libgfortran=15.1.0=h69a702a_5 - libgfortran-ng=15.1.0=h69a702a_5 - libgfortran5=15.1.0=hcea5267_5 - libglib=2.80.2=hf974151_0 - libgomp=15.1.0=h767d61c_5 - libhwloc=2.9.1=hd6dc26d_0 - libiconv=1.18=h3b78370_2 - libidn11=1.34=h1cef754_0 - libidn2=2.3.8=ha4ef2c3_0 - libjpeg-turbo=3.1.0=hb9d3cd8_0 - liblapack=3.9.0=36_h47877c9_openblas - liblzma=5.8.1=hb9d3cd8_2 - liblzma-devel=5.8.1=hb9d3cd8_2 - libnghttp2=1.51.0=hdcd2b5c_0 - libnsl=2.0.1=hb9d3cd8_1 - libopenblas=0.3.30=pthreads_h94d23a6_2 - libpng=1.6.43=h2797004_0 - libsqlite=3.46.0=hde9e2c9_0 - libssh2=1.10.0=haa6b8db_3 - libstdcxx=15.1.0=h8f9b012_5 - libstdcxx-ng=15.1.0=h4852527_5 - libtasn1=4.20.0=hb9d3cd8_0 - libtiff=4.6.0=h1dd3fc0_3 - libunistring=0.9.10=h7f98852_0 - libuuid=2.41.2=he9a06e4_0 - libwebp-base=1.6.0=hd42ef1d_0 - libxcb=1.15=h0b41bf4_0 - libxcrypt=4.4.36=hd590300_1 - libxml2=2.10.3=hca2bb57_4 - libzlib=1.2.13=h4ab18f5_6 - llvmlite=0.44.0=py311hc1e8f15_1 - mafft=7.526=h4bc722e_0 - markupsafe=3.0.3=py311h3778330_0 - mash=2.3=hc74b729_7 - matplotlib-base=3.10.1=py311h2b939e6_0 - metis=5.1.0=hd0bcaf9_1007 - minced=0.4.2=hdfd78af_1 - mkl=2023.1.0=h213fc3f_46344 - mmseqs2=16.747c6=pl5321h6a68c12_0 - mpfr=4.2.1=h90cbb55_3 - mpi=1.0=openmpi - munkres=1.0.7=py_1 - muscle=3.8.1551=h9948957_9 - mustang=3.2.4=h9948957_0 - narwhals=2.6.0=pyhcf101f3_0 - ncbi-vdb=3.2.1=h9948957_0 - ncurses=6.5=h2d0b736_3 - nettle=3.10.1=h4a9d5aa_0 - networkx=3.5=pyhe01879c_0 - numba=0.61.2=py311h6220fa4_2 - numpy=2.2.6=py311h5d046bc_0 - openjdk=11.0.1=h516909a_1016 - openjpeg=2.5.2=h488ebb8_0 - openmpi=4.1.6=hc5af2df_101 - openssl=1.1.1w=hd590300_0 - p11-kit=0.24.1=hc5aa10d_0 - packaging=25.0=pyh29332c3_1 - paml=4.10.9=h7b50bb2_1 - panaroo=1.5.2=pyhdfd78af_0 - parallel=20250822=ha770c72_0 - pasta=1.9.2=py311hefa8cab_5 - pcre=8.45=h9c3ff4c_0 - pcre2=10.43=hcad00b1_0 - peewee=3.17.6=py311h26bb8ec_0 - perl=5.32.1=7_hd590300_perl5 - perl-algorithm-diff=1.1903=pl5321hdfd78af_3 - perl-archive-tar=3.04=pl5321hdfd78af_0 - perl-b-cow=0.007=pl5321hb9d3cd8_1 - perl-base=2.23=pl5321hdfd78af_2 - perl-bio-asn1-entrezgene=1.73=pl5321hdfd78af_3 - perl-bio-coordinate=1.007001=pl5321hdfd78af_3 - perl-bio-featureio=1.6.905=pl5321hdfd78af_4 - perl-bio-samtools=1.43=pl5321he4a0461_4 - perl-bio-searchio-hmmer=1.7.3=pl5321hdfd78af_0 - perl-bio-tools-phylo-paml=1.7.3=pl5321hdfd78af_3 - perl-bio-tools-run-alignment-clustalw=1.7.4=pl5321hdfd78af_3 - perl-bio-tools-run-alignment-tcoffee=1.7.4=pl5321hdfd78af_5 - perl-bioperl=1.7.8=hdfd78af_1 - perl-bioperl-core=1.7.8=pl5321hdfd78af_1 - perl-bioperl-run=1.007003=pl5321hdfd78af_0 - perl-business-isbn=3.007=pl5321hdfd78af_0 - perl-business-isbn-data=20210112.006=pl5321hdfd78af_0 - perl-capture-tiny=0.48=pl5321hdfd78af_2 - perl-carp=1.38=pl5321hdfd78af_4 - perl-class-data-inheritable=0.09=pl5321hdfd78af_0 - perl-clone=0.46=pl5321hec16e2b_0 - perl-common-sense=3.75=pl5321hdfd78af_0 - perl-compress-raw-bzip2=2.201=pl5321h87f3376_1 - perl-compress-raw-zlib=2.105=pl5321h87f3376_0 - perl-constant=1.33=pl5321hdfd78af_2 - perl-data-dump=1.25=pl5321h7b50bb2_2 - perl-data-dumper=2.183=pl5321hec16e2b_1 - perl-db_file=1.858=pl5321hb9d3cd8_0 - perl-devel-stacktrace=2.04=pl5321hdfd78af_1 - perl-digest-hmac=1.05=pl5321hdfd78af_0 - perl-digest-md5=2.58=pl5321hec16e2b_1 - perl-encode=3.19=pl5321hec16e2b_1 - perl-encode-locale=1.05=pl5321hdfd78af_7 - perl-exception-class=1.45=pl5321hdfd78af_0 - perl-exporter=5.72=pl5321hdfd78af_2 - perl-exporter-tiny=1.002002=pl5321hdfd78af_0 - perl-extutils-makemaker=7.70=pl5321hd8ed1ab_0 - perl-file-listing=6.16=pl5321hdfd78af_0 - perl-file-path=2.18=pl5321hd8ed1ab_0 - perl-file-slurper=0.014=pl5321hdfd78af_0 - perl-file-sort=1.01=pl5321hdfd78af_3 - perl-file-spec=3.48_01=pl5321hdfd78af_2 - perl-file-temp=0.2304=pl5321hd8ed1ab_0 - perl-getopt-long=2.58=pl5321hdfd78af_0 - perl-html-parser=3.81=pl5321h4ac6f70_1 - perl-html-tagset=3.24=pl5321hdfd78af_0 - perl-http-cookiejar-lwp=0.014=pl5321hdfd78af_0 - perl-http-cookies=6.11=pl5321hdfd78af_0 - perl-http-daemon=6.16=pl5321hdfd78af_0 - perl-http-date=6.06=pl5321hdfd78af_0 - perl-http-message=7.00=pl5321hdfd78af_0 - perl-http-negotiate=6.01=pl5321hdfd78af_4 - perl-inc-latest=0.500=pl5321ha770c72_0 - perl-io-compress=2.201=pl5321h503566f_5 - perl-io-html=1.004=pl5321hdfd78af_0 - perl-io-socket-ssl=2.074=pl5321hdfd78af_0 - perl-io-string=1.08=pl5321hdfd78af_4 - perl-io-tty=1.16=pl5321hec16e2b_1 - perl-io-zlib=1.15=pl5321hdfd78af_1 - perl-ipc-run=20250809.0=pl5321hdfd78af_0 - perl-json=4.10=pl5321hdfd78af_1 - perl-json-xs=4.04=pl5321h9948957_0 - perl-libwww-perl=6.80=pl5321hdfd78af_0 - perl-libxml-perl=0.08=pl5321hdfd78af_3 - perl-list-moreutils=0.430=pl5321hdfd78af_0 - perl-list-moreutils-xs=0.430=pl5321h7b50bb2_5 - perl-lwp-mediatypes=6.04=pl5321hdfd78af_1 - perl-lwp-protocol-https=6.14=pl5321hdfd78af_1 - perl-mime-base64=3.16=pl5321hec16e2b_2 - perl-module-build=0.4234=pl5321ha770c72_1 - perl-module-load=0.34=pl5321hdfd78af_0 - perl-mozilla-ca=20250602=pl5321hdfd78af_0 - perl-net-http=6.24=pl5321hdfd78af_0 - perl-net-ssleay=1.92=pl5321h0e0aaa8_1 - perl-ntlm=1.09=pl5321hdfd78af_5 - perl-parent=0.236=pl5321hdfd78af_2 - perl-pathtools=3.75=pl5321hec16e2b_3 - perl-scalar-list-utils=1.62=pl5321hec16e2b_1 - perl-socket=2.027=pl5321h5c03b87_6 - perl-sub-uplevel=0.2800=pl5321hec16e2b_4 - perl-test-deep=1.130=pl5321hdfd78af_0 - perl-test-differences=0.69=pl5321hdfd78af_0 - perl-test-exception=0.43=pl5321hdfd78af_3 - perl-test-most=0.38=pl5321hdfd78af_0 - perl-test-needs=0.002009=pl5321hdfd78af_0 - perl-test-requiresinternet=0.05=pl5321hdfd78af_1 - perl-test-warn=0.36=pl5321hdfd78af_2 - perl-text-diff=1.45=pl5321hdfd78af_1 - perl-time-local=1.35=pl5321hdfd78af_0 - perl-timedate=2.33=pl5321hdfd78af_2 - perl-tree-dag_node=1.35=pl5321hdfd78af_0 - perl-try-tiny=0.31=pl5321hdfd78af_1 - perl-types-serialiser=1.01=pl5321hdfd78af_0 - perl-uri=5.12=pl5321hdfd78af_0 - perl-url-encode=0.03=pl5321h9ee0642_1 - perl-www-robotrules=6.02=pl5321hdfd78af_4 - perl-xml-dom=1.46=pl5321hdfd78af_1 - perl-xml-dom-xpath=0.14=pl5321hdfd78af_2 - perl-xml-namespacesupport=1.12=pl5321hdfd78af_1 - perl-xml-parser=2.44_01=pl5321hf2e2c51_1004 - perl-xml-regexp=0.04=pl5321hdfd78af_3 - perl-xml-sax=1.02=pl5321hdfd78af_1 - perl-xml-sax-base=1.09=pl5321hdfd78af_1 - perl-xml-sax-expat=0.51=pl5321hdfd78af_4 - perl-xml-simple=2.25=pl5321hdfd78af_2 - perl-xml-xpathengine=0.14=pl5321hdfd78af_3 - phylip=3.697=h7b50bb2_3 - pillow=10.3.0=py311h18e6fac_0 - pip=25.2=pyh8b19718_0 - pixman=0.46.4=h54a6638_1 - plotly=6.3.0=pyhd8ed1ab_0 - poa=2.0=h7b50bb2_6 - prank=170427=h9948957_1 - probcons=1.12=h8b12597_1 - probconsrna=1.10=h9f5acd7_4 - proda=1.0=h503566f_7 - prodigal=2.6.3=h7b50bb2_10 - prokka=1.14.6=pl5321hdfd78af_5 - psutil=7.1.3=py311haee01d2_0 - pthread-stubs=0.4=hb9d3cd8_1002 - pycparser=2.22=pyh29332c3_1 - pyfaidx=0.9.0.3=pyhdfd78af_0 - pymongo=4.14.1=py311h1ddb823_0 - pyparsing=3.2.5=pyhcf101f3_0 - pysocks=1.7.1=pyha55dd90_7 - python=3.11.0=h10a6764_1_cpython - python-dateutil=2.9.0.post0=pyhe01879c_2 - python-edlib=1.3.9.post1=py311he264feb_2 - python-igraph=0.10.4=py311hcb6f00c_0 - python_abi=3.11=8_cp311 - pyvcf3=1.0.4=py311haab0aaa_0 - qhull=2020.2=h434a139_5 - raxml=8.2.13=h7b50bb2_3 - readline=8.2=h8c095d6_2 - requests=2.32.5=pyhd8ed1ab_0 - rpsbproc=0.5.0=h6a68c12_1 - sap=1.1.3=h7b50bb2_5 - scikit-learn=1.7.2=py311hc3e1efb_0 - scipy=1.16.2=py311h1e13796_0 - setuptools=80.9.0=pyhff2d567_0 - simplejson=3.20.2=py311h49ec1c0_0 - six=1.17.0=pyhe01879c_1 - sniffio=1.3.1=pyhd8ed1ab_1 - sqlite=3.46.0=h6d4b2fc_0 - suitesparse=5.10.1=h9e50725_1 - t-coffee=13.46.1.b8b01e06=pl5321hb2a3317_2 - taxadb=0.12.1=pyh5e36f6f_0 - tbb=2021.9.0=hf52228f_0 - tbl2asn-forever=25.7.2f=h7b50bb2_6 - texttable=1.7.0=pyhd8ed1ab_1 - threadpoolctl=3.6.0=pyhecae5ae_0 - tk=8.6.13=noxft_h4845f30_101 - tmalign=20220227=h9948957_0 - tqdm=4.67.1=pyhd8ed1ab_1 - tzdata=2025b=h78e105d_0 - unicodedata2=16.0.0=py311h49ec1c0_1 - urllib3=2.5.0=pyhd8ed1ab_0 - viennarna=2.7.0=py311pl5321h0f867f1_0 - wget=1.20.3=ha56f1ee_1 - wheel=0.45.1=pyhd8ed1ab_1 - xlsxwriter=3.2.9=pyhd8ed1ab_0 - xorg-fixesproto=5.0=hb9d3cd8_1003 - xorg-inputproto=2.3.2=hb9d3cd8_1003 - xorg-kbproto=1.0.7=hb9d3cd8_1003 - xorg-libice=1.1.2=hb9d3cd8_0 - xorg-libsm=1.2.6=he73a12e_0 - xorg-libx11=1.8.9=h8ee46fc_0 - xorg-libxau=1.0.12=hb9d3cd8_0 - xorg-libxdmcp=1.1.5=hb9d3cd8_0 - xorg-libxext=1.3.4=h0b41bf4_2 - xorg-libxfixes=5.0.3=h7f98852_1004 - xorg-libxi=1.7.10=h4bc722e_1 - xorg-libxrender=0.9.11=hd590300_0 - xorg-libxt=1.3.0=hd590300_1 - xorg-libxtst=1.2.5=h4bc722e_0 - xorg-recordproto=1.14.2=hb9d3cd8_1003 - xorg-renderproto=0.11.1=hb9d3cd8_1003 - xorg-xextproto=7.3.0=hb9d3cd8_1004 - xorg-xproto=7.0.31=hb9d3cd8_1008 - xz=5.8.1=hbcc6ac9_2 - xz-gpl-tools=5.8.1=hbcc6ac9_2 - xz-tools=5.8.1=hb9d3cd8_2 - zipp=3.23.0=pyhd8ed1ab_0 - zlib=1.2.13=h4ab18f5_6 - zstandard=0.23.0=py311h49ec1c0_3 - zstd=1.5.6=ha6fb4c9_0 - pip: - blessed==1.25.0 - gpustat==1.1.1 - nvidia-ml-py==13.580.82 - wcwidth==0.2.14 prefix: /home/gzy/miniforge3/envs/prokka