lingyuzeng/bttoxin-pipeline
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c75c85c53bcd3bbc65400f2964d23624c01486a1
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4 Commits

Author SHA1 Message Date
zly
c75c85c53b Refactor: Unified pipeline execution, simplified UI, and fixed Docker config 
- Backend: Refactored tasks.py to directly invoke run_single_fna_pipeline.py for consistency.
- Backend: Changed output format to ZIP and added auto-cleanup of intermediate files.
- Backend: Fixed language parameter passing in API and tasks.
- Frontend: Removed CRISPR Fusion UI elements from Submit and Monitor views.
- Frontend: Implemented simulated progress bar for better UX.
- Frontend: Restored One-click load button and added result file structure documentation.
- Docker: Fixed critical Restarting loop by removing incorrect image directive in docker-compose.yml.
- Docker: Optimized Dockerfile to correct .pixi environment path issues and prevent accidental deletion of frontend assets.
 2026-01-20 20:25:25 +08:00
zly
9835b6e341 feat(deploy): fix docker deployment and add backend i18n 
- Docker Deployment Fixes:
  - Switch base images to docker.m.daocloud.io to resolve registry 401 errors
  - Add Postgres and Redis services to docker-compose.traefik.yml
  - Fix frontend build: replace missing icons (Globe->Location, Chart->TrendCharts)
  - Fix frontend build: resolve pnpm CI/TTY issues and frozen lockfile errors
  - Add missing backend dependencies (sqlalchemy, psycopg2, redis-py, celery, docker-py) in pixi.toml
  - Ensure database tables are created on startup (lifespan event)

- Backend Internationalization (i18n):
  - Add backend/app/core/i18n.py for locale handling
  - Update API endpoints (jobs, tasks, uploads, results) to return localized messages
  - Support 'Accept-Language' header (en/zh)

- Documentation:
  - Update DOCKER_DEPLOYMENT.md with new architecture and troubleshooting
  - Update AGENTS.md with latest stack details and deployment steps
  - Update @fix_plan.md status

Co-Authored-By: Claude <noreply@anthropic.com>
 2026-01-14 12:38:54 +08:00
zly
1a1ba71777 feat(docker): add SPA static file serving and fix Dockerfile paths\n\n- Add backend/app/main_spa.py with FastAPI static file serving for SPA\n- Fix Dockerfile.traefik to use correct backend path (backend.app.main_spa)\n- Remove web/ references (project has backend/ at root)\n- Frontend dist files served from /app/frontend/dist\n- Health check endpoint at /health\n- Supports Traefik reverse proxy at bttiaw.hzau.edu.cn\n\nCo-Authored-By: Claude <noreply@anthropic.com> 2026-01-13 23:49:19 +08:00
zly
fe353fc0bc chore: 初始版本提交 - 简化架构 + 轮询改造 
- 移除 Motia Streams 实时通信，改用 3 秒轮询
- 简化前端代码，移除冗余组件
- 简化后端架构，准备 FastAPI 重构
- 更新 pixi.toml 环境配置
- 保留 bttoxin_digger_v5_repro 作为参考文档

Co-Authored-By: Claude <noreply@anthropic.com>
 2026-01-13 16:50:09 +08:00