4 Commits

Author	SHA1	Message	Date
zly	c75c85c53b	Refactor: Unified pipeline execution, simplified UI, and fixed Docker config ... - Backend: Refactored tasks.py to directly invoke run_single_fna_pipeline.py for consistency. - Backend: Changed output format to ZIP and added auto-cleanup of intermediate files. - Backend: Fixed language parameter passing in API and tasks. - Frontend: Removed CRISPR Fusion UI elements from Submit and Monitor views. - Frontend: Implemented simulated progress bar for better UX. - Frontend: Restored One-click load button and added result file structure documentation. - Docker: Fixed critical Restarting loop by removing incorrect image directive in docker-compose.yml. - Docker: Optimized Dockerfile to correct .pixi environment path issues and prevent accidental deletion of frontend assets.	2026-01-20 20:25:25 +08:00
zly	d4f0e27af8	feat(backend): add missing API endpoints, concurrency control, and queue management\n\n- Add /api/v1/tasks router for task management\n- Add DELETE endpoint for task deletion\n- Add GET /download endpoint for result bundling (tar.gz)\n- Add GET /queue endpoint for queue position queries\n- Create ConcurrencyManager service with Redis Semaphore (16 concurrent limit)\n- Add QUEUED status to JobStatus enum\n- Update Job model with queue_position, current_stage, progress_percent fields\n- Add scoring parameters (min_identity, min_coverage, etc.) to jobs API\n- Implement pipeline stages: digger -> shoter -> plots -> bundle\n- Add update_queue_positions Celery task for periodic queue updates\n- Clean up duplicate code in main.py\n\nCo-Authored-By: Claude <noreply@anthropic.com>	2026-01-13 23:41:15 +08:00
lingyuzeng	d71163df00	first add	2025-10-13 21:05:00 +08:00
lingyuzeng	c7744836e9	Initial commit: BtToxin Pipeline project structure	2025-10-13 19:22:56 +08:00