diff --git a/bttoxin-pipeline.png b/bttoxin-pipeline.png new file mode 100644 index 0000000..a03c818 Binary files /dev/null and b/bttoxin-pipeline.png differ diff --git a/bttoxin-pipeline.svg b/bttoxin-pipeline.svg new file mode 100644 index 0000000..1fa0c3c --- /dev/null +++ b/bttoxin-pipeline.svg @@ -0,0 +1 @@ +·  Digger·  Shoter·  Analysisgenome fileORF/CDSpreditionBtToxinDiggerTranslateproteinsequenceToxin identificationBlast/HMM*.list/*.gbkAll_Toxin.txtBPPRCspecificity CSVtoxicity-data.txtBuild specificity indexPer-hit parsingone row per toxin hitComputer similarity weightPer-hit scoringPer-strain combinationnoisy-OR over hitshit & order/speciescontributionsstrain & order scoresstrain & species scores, optionalstrain scores.jsontoxin_support.tsvstrain_target_scores.tsvstrain target species scores.tsvAnalysis and Visualizationheatmapreportper-hitper-orderzh|enOther visualization methodsplot_shotter.pyper-strainother_plot.py \ No newline at end of file