lingyuzeng/analysis_pdb
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2024-01-25 13:57:37 +08:00
parent dc54997d3d
commit 804062bc7a
1 changed files with 1 additions and 1 deletions
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modelbuilder.py
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@@ -137,7 +137,7 @@ class LoopModelBuilder:
workdir.mkdir(exist_ok=True, parents=True)
mc_fasta = self.analyzer_instance.find_most_similar(self.sequences[mc]) # get misschain fasta file
# write fasta file
mc_fasta_record = SeqRecord(mc_fasta, id=f'{mc}', description=f'{self.pdb_id}|{mc}')
mc_fasta_record = SeqRecord(mc_fasta, id=f'{mc}', description=f'{self.pdb_id}_{mc}')
out_fasta_file = workdir.joinpath(f'{self.analyzer_instance.pid}_{mc}.fasta')
self.analyzer_instance.write_seq_to_fasta_single_line(mc_fasta_record, out_fasta_file)
self.logger.info(f'>{self.pdb_id}|{mc}|missing site:{self.missing_info[mc]}|length:{len(mc_fasta)}')