update last

fixsequence.py

@@ -0,0 +1,23 @@
+#!/usr/bin/env python
+# -*- encoding: utf-8 -*-
+'''
+@file               :fixsequence.py
+@Description:       : fix sequence of pdb file
+@Date               :2024/03/07 09:44:06
+@Author             :lyzeng
+@Email              :pylyzeng@gmail.com
+@version            :1.0
+'''
+from analysis_pdb import PDBAnalyzer
+from pathlib import Path
+# Specify the path to your PDB file
+pdb_files = [
+    Path('./pdb_test9/1zgl.pdb'),
+    Path('./pdb_test9/1g6r.pdb'),
+    Path('./pdb_test9/1mwa.pdb'),
+    Path('./pdb_test9/6bga.pdb'),
+]
+for pdb_file in pdb_files:
+    # 修复所有链的编号
+    pdb_analyzer_instance = PDBAnalyzer.renumber_residues_based_on_issues_and_clean(pdb_file)
+    print(pdb_file.stem, pdb_analyzer_instance.renumber_errors)