```shell

```

```shell
python run_alphafold.py \
    --db_dir=/app/alphafold/alphafold3_database \
    --json_path=/app/alphafold/alphafold_input.json \
    --model_dir=/app/alphafold/models \
    --output_dir=/app/alphafold/af_output \
    --run_data_pipeline true \
    --run_inference true
```