lingyuzeng/SIME
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This commit is contained in:
mm644706215
2025-02-26 12:56:45 +08:00
parent 45766db7dd
commit d5f510ce2c
1 changed files with 3 additions and 3 deletions
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SIME.py
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@@ -188,11 +188,11 @@ class SIME:
max_per_file = 1000000 max_per_file = 1000000
file_counter = 1 file_counter = 1
written = [] written = []
for item in product(*template): for item in product(*template): # 使用笛卡尔积枚举所有模板的组合
if self.max_occurrence(list(item))[1] <= self.max_repeat_motifs: # If the count of most common SM is less than or equal to the number set up by the user if self.max_occurrence(list(item))[1] <= self.max_repeat_motifs:# 确保用户定义的重复约束 # If the count of most common SM is less than or equal to the number set up by the user
if self.library_size <= max_per_file: if self.library_size <= max_per_file:
if self.total_numcompounds <= self.library_size: if self.total_numcompounds <= self.library_size:
temp = ''.join([str(r) for r in item]) temp = ''.join([str(r) for r in item]) # 将片段组合成字符串
self.total_numcompounds += 1 self.total_numcompounds += 1
written.append(temp) written.append(temp)
else: else: